Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AC147876.1-201ENST00000504408 322 ntBASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 HNRNPA1P5-201ENST00000558213 966 ntBASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 BX088702.1-201ENST00000610784 235 ntBASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CSMD1Q96PZ7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
CSMD1Q96PZ7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CSMD1Q96PZ7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
CSMD1Q96PZ7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CSMD1Q96PZ7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.15□□□□□ -0.47
CSMD1Q96PZ7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CSMD1Q96PZ7 AC104581.4-201ENST00000623126 3052 ntBASIC12.15□□□□□ -0.47
CSMD1Q96PZ7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 B9D1-206ENST00000461069 923 ntTSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 SNX18-202ENST00000343017 3140 ntBASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 RN7SL128P-201ENST00000467883 305 ntBASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 ZBED1P1-201ENST00000502364 1930 ntBASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 RN7SL440P-201ENST00000577855 343 ntBASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 AL109954.1-202ENST00000564051 2148 ntBASIC12.14□□□□□ -0.47
CSMD1Q96PZ7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CSMD1Q96PZ7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms