Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.9■□□□□ 0.14
ACAP3Q96P50 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.9■□□□□ 0.14
ACAP3Q96P50 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.9■□□□□ 0.14
ACAP3Q96P50 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
ACAP3Q96P50 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.9■□□□□ 0.14
ACAP3Q96P50 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 OR2I1P-209ENST00000641730 5365 ntBASIC15.9■□□□□ 0.14
ACAP3Q96P50 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ACAP3Q96P50 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
ACAP3Q96P50 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.89■□□□□ 0.13
ACAP3Q96P50 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 AC125604.1-201ENST00000496255 707 ntBASIC15.89■□□□□ 0.13
ACAP3Q96P50 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 AC133540.1-201ENST00000620845 1019 ntBASIC15.89■□□□□ 0.13
ACAP3Q96P50 AL805961.1-203ENST00000641078 1258 ntBASIC15.89■□□□□ 0.13
ACAP3Q96P50 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ACAP3Q96P50 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ACAP3Q96P50 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 AC026748.1-201ENST00000624349 3251 ntBASIC15.88■□□□□ 0.13
ACAP3Q96P50 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 MIR769-201ENST00000390225 118 ntBASIC15.88■□□□□ 0.13
ACAP3Q96P50 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.88■□□□□ 0.13
ACAP3Q96P50 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 AC009779.1-201ENST00000551138 283 ntBASIC15.88■□□□□ 0.13
ACAP3Q96P50 AC091544.8-201ENST00000619490 361 ntBASIC15.88■□□□□ 0.13
ACAP3Q96P50 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
ACAP3Q96P50 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.88■□□□□ 0.13
ACAP3Q96P50 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms