Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 KRT8P35-201ENST00000483942 1338 ntBASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CLPTM1LQ96KA5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AL590627.1-203ENST00000421194 1026 ntBASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AC005237.2-201ENST00000434368 219 ntBASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLPTM1LQ96KA5 SALL4P5-201ENST00000419001 1760 ntBASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 AC102953.2-201ENST00000609755 3026 ntBASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 YBX2P1-201ENST00000394192 760 ntBASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 KRT18P3-201ENST00000451602 1288 ntBASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 MIR4453-201ENST00000584019 89 ntBASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 AC140113.2-201ENST00000604370 208 ntBASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 AL928654.5-201ENST00000624831 2501 ntBASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPTM1LQ96KA5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CLPTM1LQ96KA5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLPTM1LQ96KA5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPTM1LQ96KA5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPTM1LQ96KA5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLPTM1LQ96KA5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLPTM1LQ96KA5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms