Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 AL357373.1-201ENST00000394974 322 ntBASIC17.43■□□□□ 0.38
SNED1Q8TER0 MIR1301-201ENST00000408518 82 ntBASIC17.43■□□□□ 0.38
SNED1Q8TER0 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 AC063952.3-201ENST00000467756 308 ntBASIC17.43■□□□□ 0.38
SNED1Q8TER0 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SNED1Q8TER0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNED1Q8TER0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 RPL3P2-204ENST00000413027 1203 ntBASIC17.42■□□□□ 0.38
SNED1Q8TER0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 AC148477.9-201ENST00000623974 539 ntBASIC17.42■□□□□ 0.38
SNED1Q8TER0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNED1Q8TER0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.42■□□□□ 0.38
SNED1Q8TER0 CCT8L1P-201ENST00000465400 1674 ntBASIC17.41■□□□□ 0.38
SNED1Q8TER0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 SORD2P-201ENST00000558556 1069 ntBASIC17.41■□□□□ 0.38
SNED1Q8TER0 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 AP005212.2-201ENST00000584979 510 ntBASIC17.41■□□□□ 0.38
SNED1Q8TER0 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNED1Q8TER0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNED1Q8TER0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNED1Q8TER0 GEMIN8P4-201ENST00000380526 729 ntBASIC17.4■□□□□ 0.38
SNED1Q8TER0 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.4■□□□□ 0.38
SNED1Q8TER0 ALG1L3P-201ENST00000503331 765 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms