Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SHKBP1Q8TBC3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 AC144522.1-201ENST00000625111 1658 ntBASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 CYP4F23P-201ENST00000593402 1579 ntBASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 AL035414.1-201ENST00000451327 857 ntBASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 AC006453.1-201ENST00000636037 1257 ntBASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 KRT8P21-201ENST00000430398 1491 ntBASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 AC140479.7-201ENST00000636301 2332 ntBASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SHKBP1Q8TBC3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 GRK6P1-201ENST00000400595 1711 ntBASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 AC239868.1-201ENST00000369385 493 ntBASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 IGLV3-15-201ENST00000518356 244 ntBASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.37■□□□□ 0.05
SHKBP1Q8TBC3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms