Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 AC105443.1-201ENST00000433754 712 ntBASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 RN7SL452P-201ENST00000482923 291 ntBASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 FP325317.1-201ENST00000539936 1042 ntBASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 AC136475.9-201ENST00000605240 497 ntBASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 AL356583.1-201ENST00000398739 1371 ntBASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LTBP4Q8N2S1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 NAA10-205ENST00000393712 908 ntTSL 5 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 AC104212.2-201ENST00000478813 628 ntBASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 AP001979.1-201ENST00000529222 751 ntBASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 AC103810.4-201ENST00000578601 257 ntBASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 AC073592.10-201ENST00000624789 597 ntBASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 GARS-210ENST00000627489 324 ntTSL 4 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LTBP4Q8N2S1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 APRT-202ENST00000426324 664 ntTSL 2 BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 AC008267.3-201ENST00000448776 712 ntBASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 AP001102.1-201ENST00000528959 409 ntBASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LTBP4Q8N2S1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 SDCBP2P1-201ENST00000416115 614 ntBASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 SORD2P-201ENST00000558556 1069 ntBASIC19.29■□□□□ 0.68
LTBP4Q8N2S1 DNM1P50-201ENST00000565767 508 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms