Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC004898.1-201ENST00000451057 766 ntBASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 AC103810.3-201ENST00000583567 96 ntBASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM48Q8IWZ4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 AC022494.1-201ENST00000466044 728 ntBASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 AC126915.1-201ENST00000522847 1038 ntBASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 MIR3615-201ENST00000581999 87 ntBASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 AL023803.2-201ENST00000620080 638 ntBASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 AC244452.3-201ENST00000636814 210 ntBASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM48Q8IWZ4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 KRT8P29-201ENST00000420409 1371 ntBASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM48Q8IWZ4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 PEG13-201ENST00000631594 5667 ntBASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRIM48Q8IWZ4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms