Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.34□□□□□ -0.27
RP1L1Q8IWN7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RP1L1Q8IWN7 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RP1L1Q8IWN7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RP1L1Q8IWN7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.33□□□□□ -0.27
RP1L1Q8IWN7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
RP1L1Q8IWN7 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
RP1L1Q8IWN7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 CR383656.3-201ENST00000551315 183 ntBASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 FO393412.1-201ENST00000619841 382 ntBASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 AC148477.9-201ENST00000623974 539 ntBASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 MIR557-201ENST00000385239 98 ntBASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 AC008723.1-201ENST00000506922 207 ntBASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 RN7SL470P-201ENST00000583069 259 ntBASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RP1L1Q8IWN7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 AP000845.1-201ENST00000581677 2131 ntBASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 AL512430.1-201ENST00000392575 860 ntBASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 RPL5P21-201ENST00000404620 815 ntBASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 RPL8P2-201ENST00000430538 502 ntBASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 MRPL22P1-201ENST00000505398 616 ntBASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 AC008825.2-201ENST00000603374 718 ntBASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RP1L1Q8IWN7 AC092053.3-201ENST00000641308 4975 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms