Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC18■□□□□ 0.47
COL23A1Q86Y22 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
COL23A1Q86Y22 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18■□□□□ 0.47
COL23A1Q86Y22 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL23A1Q86Y22 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 FAM21EP-201ENST00000417804 985 ntBASIC17.99■□□□□ 0.47
COL23A1Q86Y22 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 KRT8P30-201ENST00000432100 650 ntBASIC17.99■□□□□ 0.47
COL23A1Q86Y22 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 NRADDP-201ENST00000437305 691 ntBASIC17.99■□□□□ 0.47
COL23A1Q86Y22 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 RN7SL556P-201ENST00000582856 298 ntBASIC17.99■□□□□ 0.47
COL23A1Q86Y22 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 AL136982.5-201ENST00000605222 294 ntBASIC17.99■□□□□ 0.47
COL23A1Q86Y22 AC090510.3-201ENST00000615831 821 ntBASIC17.99■□□□□ 0.47
COL23A1Q86Y22 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL23A1Q86Y22 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 CICP6-201ENST00000457191 2729 ntBASIC17.98■□□□□ 0.47
COL23A1Q86Y22 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 AC025594.1-201ENST00000469533 543 ntBASIC17.98■□□□□ 0.47
COL23A1Q86Y22 AC113347.2-201ENST00000512350 279 ntBASIC17.98■□□□□ 0.47
COL23A1Q86Y22 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 GGNBP1-204ENST00000613113 887 ntBASIC17.98■□□□□ 0.47
COL23A1Q86Y22 PHF23-213ENST00000613632 850 ntTSL 5 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.98■□□□□ 0.47
COL23A1Q86Y22 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.98■□□□□ 0.47
COL23A1Q86Y22 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL23A1Q86Y22 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms