Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 AC133552.6-201ENST00000613406 534 ntBASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 WFDC1-204ENST00000613603 549 ntBASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
FOXR1Q6PIV2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 AC007389.4-201ENST00000454674 793 ntBASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 TPT1P11-201ENST00000458482 498 ntBASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 AC092658.1-201ENST00000505836 891 ntBASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 AC106886.1-201ENST00000568660 600 ntBASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FOXR1Q6PIV2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 SPDYE17-201ENST00000412399 783 ntBASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 STK33P1-201ENST00000423835 1218 ntBASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 KRT223P-202ENST00000449164 1292 ntBASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 AL033527.5-201ENST00000641382 801 ntBASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FOXR1Q6PIV2 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms