Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
HS1BP3Q53T59 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HS1BP3Q53T59 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HS1BP3Q53T59 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.46■□□□□ 0.22
HS1BP3Q53T59 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
HS1BP3Q53T59 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HS1BP3Q53T59 AL157414.3-201ENST00000624276 1954 ntBASIC16.46■□□□□ 0.22
HS1BP3Q53T59 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.46■□□□□ 0.22
HS1BP3Q53T59 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HS1BP3Q53T59 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 AL359845.1-201ENST00000458202 1648 ntBASIC16.45■□□□□ 0.22
HS1BP3Q53T59 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 SPCS2P4-201ENST00000436160 681 ntBASIC16.45■□□□□ 0.22
HS1BP3Q53T59 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HS1BP3Q53T59 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 CARS-214ENST00000529772 2637 ntTSL 2 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 AC055876.3-201ENST00000431496 288 ntBASIC16.44■□□□□ 0.22
HS1BP3Q53T59 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 AC138649.4-201ENST00000612222 287 ntBASIC16.44■□□□□ 0.22
HS1BP3Q53T59 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 AC026271.4-201ENST00000578214 1833 ntBASIC16.44■□□□□ 0.22
HS1BP3Q53T59 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 AC110048.1-201ENST00000604293 2157 ntBASIC16.44■□□□□ 0.22
HS1BP3Q53T59 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HS1BP3Q53T59 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HS1BP3Q53T59 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms