Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.14■□□□□ 0.33
PPP4CP60510 MIR6842-201ENST00000612539 65 ntBASIC17.14■□□□□ 0.33
PPP4CP60510 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PPP4CP60510 AP001184.1-201ENST00000637936 376 ntBASIC17.14■□□□□ 0.33
PPP4CP60510 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.14■□□□□ 0.33
PPP4CP60510 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP4CP60510 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.14■□□□□ 0.33
PPP4CP60510 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.14■□□□□ 0.33
PPP4CP60510 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.14■□□□□ 0.33
PPP4CP60510 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PPP4CP60510 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PPP4CP60510 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.13■□□□□ 0.33
PPP4CP60510 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PPP4CP60510 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.13■□□□□ 0.33
PPP4CP60510 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.13■□□□□ 0.33
PPP4CP60510 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PPP4CP60510 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.13■□□□□ 0.33
PPP4CP60510 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.13■□□□□ 0.33
PPP4CP60510 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 DNM1P30-201ENST00000563586 452 ntBASIC17.13■□□□□ 0.33
PPP4CP60510 AL031713.1-201ENST00000564813 661 ntBASIC17.13■□□□□ 0.33
PPP4CP60510 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PPP4CP60510 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC17.13■□□□□ 0.33
PPP4CP60510 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PPP4CP60510 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 AL390755.1-201ENST00000623716 2027 ntBASIC17.13■□□□□ 0.33
PPP4CP60510 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PPP4CP60510 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PPP4CP60510 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.13■□□□□ 0.33
PPP4CP60510 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.12■□□□□ 0.33
PPP4CP60510 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 AP000356.3-201ENST00000382243 753 ntBASIC17.12■□□□□ 0.33
PPP4CP60510 MIR645-201ENST00000385283 94 ntBASIC17.12■□□□□ 0.33
PPP4CP60510 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 RN7SL81P-201ENST00000493781 261 ntBASIC17.12■□□□□ 0.33
PPP4CP60510 MRPL22P1-201ENST00000505398 616 ntBASIC17.12■□□□□ 0.33
PPP4CP60510 ALG1L13P-202ENST00000519320 584 ntBASIC17.12■□□□□ 0.33
PPP4CP60510 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.12■□□□□ 0.33
PPP4CP60510 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.12■□□□□ 0.33
PPP4CP60510 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 MIR5572-201ENST00000583188 137 ntBASIC17.12■□□□□ 0.33
PPP4CP60510 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.12■□□□□ 0.33
PPP4CP60510 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
PPP4CP60510 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.12■□□□□ 0.33
PPP4CP60510 AC015802.1-201ENST00000588104 1449 ntBASIC17.12■□□□□ 0.33
PPP4CP60510 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 AC007952.5-201ENST00000572818 1486 ntBASIC17.12■□□□□ 0.33
PPP4CP60510 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PPP4CP60510 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP4CP60510 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
PPP4CP60510 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PPP4CP60510 AP001267.2-201ENST00000532619 2086 ntBASIC17.11■□□□□ 0.33
PPP4CP60510 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PPP4CP60510 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.11■□□□□ 0.33
PPP4CP60510 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PPP4CP60510 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms