Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CDH12P55289 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CDH12P55289 KLF2P2-201ENST00000416807 1039 ntBASIC13.74□□□□□ -0.21
CDH12P55289 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 AC026434.2-201ENST00000506094 1078 ntBASIC13.74□□□□□ -0.21
CDH12P55289 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.74□□□□□ -0.21
CDH12P55289 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.74□□□□□ -0.21
CDH12P55289 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 AC092364.2-202ENST00000597012 1073 ntBASIC13.74□□□□□ -0.21
CDH12P55289 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.74□□□□□ -0.21
CDH12P55289 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 CICP8-201ENST00000455800 2813 ntBASIC13.74□□□□□ -0.21
CDH12P55289 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CDH12P55289 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.74□□□□□ -0.21
CDH12P55289 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDH12P55289 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH12P55289 MIR770-201ENST00000390219 98 ntBASIC13.73□□□□□ -0.21
CDH12P55289 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH12P55289 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CDH12P55289 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH12P55289 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH12P55289 TMEM198B-204ENST00000484016 896 ntBASIC13.73□□□□□ -0.21
CDH12P55289 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH12P55289 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
CDH12P55289 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH12P55289 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.73□□□□□ -0.21
CDH12P55289 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.73□□□□□ -0.21
CDH12P55289 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
CDH12P55289 AL132655.2-201ENST00000596276 594 ntBASIC13.73□□□□□ -0.21
CDH12P55289 CHCHD2P3-201ENST00000603038 451 ntBASIC13.73□□□□□ -0.21
CDH12P55289 AC133539.2-201ENST00000604757 467 ntBASIC13.73□□□□□ -0.21
CDH12P55289 TMEM261P1-201ENST00000604899 340 ntBASIC13.73□□□□□ -0.21
CDH12P55289 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH12P55289 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CDH12P55289 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 AC011840.2-201ENST00000563063 1520 ntBASIC13.73□□□□□ -0.21
CDH12P55289 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDH12P55289 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.73□□□□□ -0.21
CDH12P55289 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDH12P55289 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDH12P55289 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.72□□□□□ -0.21
CDH12P55289 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDH12P55289 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDH12P55289 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms