Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GBX2P52951 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GBX2P52951 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.16□□□□□ -0.3
GBX2P52951 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GBX2P52951 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.16□□□□□ -0.3
GBX2P52951 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
GBX2P52951 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.16□□□□□ -0.3
GBX2P52951 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
GBX2P52951 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.16□□□□□ -0.3
GBX2P52951 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GBX2P52951 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GBX2P52951 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GBX2P52951 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GBX2P52951 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GBX2P52951 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 AC015909.5-201ENST00000624336 2266 ntBASIC13.15□□□□□ -0.3
GBX2P52951 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
GBX2P52951 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GBX2P52951 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.15□□□□□ -0.3
GBX2P52951 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.15□□□□□ -0.3
GBX2P52951 AL139094.1-201ENST00000405549 1188 ntBASIC13.15□□□□□ -0.3
GBX2P52951 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.15□□□□□ -0.3
GBX2P52951 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.15□□□□□ -0.3
GBX2P52951 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.15□□□□□ -0.3
GBX2P52951 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.15□□□□□ -0.3
GBX2P52951 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.15□□□□□ -0.3
GBX2P52951 AL049840.4-201ENST00000602422 811 ntBASIC13.15□□□□□ -0.3
GBX2P52951 AL844908.2-201ENST00000609461 460 ntBASIC13.15□□□□□ -0.3
GBX2P52951 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
GBX2P52951 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.15□□□□□ -0.3
GBX2P52951 PRSS30P-206ENST00000641773 873 ntBASIC13.15□□□□□ -0.3
GBX2P52951 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.15□□□□□ -0.3
GBX2P52951 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 MEX3B-202ENST00000558133 4333 ntBASIC13.15□□□□□ -0.3
GBX2P52951 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.15□□□□□ -0.3
GBX2P52951 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.15□□□□□ -0.3
GBX2P52951 AC105206.1-202ENST00000314927 2368 ntBASIC13.15□□□□□ -0.3
GBX2P52951 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 CICP16-201ENST00000502609 2813 ntBASIC13.15□□□□□ -0.3
GBX2P52951 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
GBX2P52951 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GBX2P52951 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
GBX2P52951 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
GBX2P52951 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
GBX2P52951 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
GBX2P52951 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
GBX2P52951 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
GBX2P52951 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 KRT8P35-201ENST00000483942 1338 ntBASIC13.14□□□□□ -0.31
GBX2P52951 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.14□□□□□ -0.31
GBX2P52951 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.14□□□□□ -0.31
GBX2P52951 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 AC015688.4-201ENST00000580780 1647 ntBASIC13.14□□□□□ -0.31
GBX2P52951 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.14□□□□□ -0.31
GBX2P52951 AC083964.2-201ENST00000623988 2396 ntBASIC13.14□□□□□ -0.31
GBX2P52951 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
GBX2P52951 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
GBX2P52951 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.14□□□□□ -0.31
GBX2P52951 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.14□□□□□ -0.31
GBX2P52951 RPSAP43-201ENST00000402237 625 ntBASIC13.14□□□□□ -0.31
GBX2P52951 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.14□□□□□ -0.31
GBX2P52951 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.14□□□□□ -0.31
GBX2P52951 KLF2P3-201ENST00000451977 1087 ntBASIC13.14□□□□□ -0.31
GBX2P52951 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 RPL13AP25-201ENST00000484130 612 ntBASIC13.14□□□□□ -0.31
GBX2P52951 HLA-J-203ENST00000494367 1087 ntBASIC13.14□□□□□ -0.31
GBX2P52951 AL603764.1-201ENST00000636452 321 ntBASIC13.14□□□□□ -0.31
GBX2P52951 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
GBX2P52951 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
GBX2P52951 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.14□□□□□ -0.31
GBX2P52951 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms