Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
EFNB2P52799 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
EFNB2P52799 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
EFNB2P52799 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
EFNB2P52799 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
EFNB2P52799 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
EFNB2P52799 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
EFNB2P52799 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
EFNB2P52799 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
EFNB2P52799 SALL4P5-201ENST00000419001 1760 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 Z82170.1-201ENST00000625081 3192 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
EFNB2P52799 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 AL136172.1-201ENST00000598590 1394 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 GK-202ENST00000378941 458 ntTSL 3 BASIC12.74□□□□□ -0.37
EFNB2P52799 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.74□□□□□ -0.37
EFNB2P52799 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 DFFBP1-201ENST00000433250 979 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 AL589987.1-201ENST00000453380 819 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.74□□□□□ -0.37
EFNB2P52799 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.74□□□□□ -0.37
EFNB2P52799 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 AC104794.3-201ENST00000566840 1248 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 AC140912.1-201ENST00000577171 1054 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 AL365181.3-201ENST00000605886 3222 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 AC068760.1-201ENST00000493579 1953 ntBASIC12.74□□□□□ -0.37
EFNB2P52799 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.74□□□□□ -0.37
EFNB2P52799 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
EFNB2P52799 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
EFNB2P52799 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
EFNB2P52799 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
EFNB2P52799 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB2P52799 AC004241.5-201ENST00000623870 2448 ntBASIC12.73□□□□□ -0.37
EFNB2P52799 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB2P52799 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB2P52799 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB2P52799 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB2P52799 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
EFNB2P52799 AC072061.1-201ENST00000569710 2234 ntBASIC12.73□□□□□ -0.37
EFNB2P52799 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
EFNB2P52799 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms