Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 AC023310.3-201ENST00000557027 670 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC9.4□□□□□ -0.9
UBE2AP49459 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC9.4□□□□□ -0.9
UBE2AP49459 AC100756.1-201ENST00000562736 682 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 AC138749.3-201ENST00000567691 622 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 ARL16-202ENST00000570561 768 ntTSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
UBE2AP49459 AC116165.1-201ENST00000611806 668 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC9.4□□□□□ -0.9
UBE2AP49459 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 AL158070.2-201ENST00000623713 1621 ntBASIC9.4□□□□□ -0.9
UBE2AP49459 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
UBE2AP49459 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE2AP49459 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
UBE2AP49459 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC9.4□□□□□ -0.91
UBE2AP49459 LRRC59-203ENST00000576448 1531 ntBASIC9.4□□□□□ -0.91
UBE2AP49459 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC9.4□□□□□ -0.91
UBE2AP49459 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.91
UBE2AP49459 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
UBE2AP49459 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
UBE2AP49459 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC9.4□□□□□ -0.91
UBE2AP49459 DRD5P1-201ENST00000456605 1438 ntBASIC9.39□□□□□ -0.91
UBE2AP49459 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC9.39□□□□□ -0.91
UBE2AP49459 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 AC092183.1-201ENST00000469884 875 ntBASIC9.39□□□□□ -0.91
UBE2AP49459 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC9.39□□□□□ -0.91
UBE2AP49459 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 AQP6-203ENST00000551733 849 ntTSL 3 BASIC9.39□□□□□ -0.91
UBE2AP49459 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC9.39□□□□□ -0.91
UBE2AP49459 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 AC005498.2-205ENST00000593218 784 ntBASIC9.39□□□□□ -0.91
UBE2AP49459 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 AC133539.2-201ENST00000604757 467 ntBASIC9.39□□□□□ -0.91
UBE2AP49459 AC093726.1-201ENST00000608064 963 ntBASIC9.39□□□□□ -0.91
UBE2AP49459 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC9.39□□□□□ -0.91
UBE2AP49459 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC9.39□□□□□ -0.91
UBE2AP49459 AC140479.7-201ENST00000636301 2332 ntBASIC9.39□□□□□ -0.91
UBE2AP49459 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
UBE2AP49459 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms