RNA–Protein interactions for RNA: ENST00000316364.9

SEMA6D-201, Transcript of semaphorin 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6D, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-201ENST00000316364 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
SEMA6D-201ENST00000316364 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
SEMA6D-201ENST00000316364 SUPT5HO00267 1087 aaKnown RBP19.52■□□□□ 0.72
SEMA6D-201ENST00000316364 FAM9AQ8IZU1 332 aaPredicted RBP19.45■□□□□ 0.7
SEMA6D-201ENST00000316364 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
SEMA6D-201ENST00000316364 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
SEMA6D-201ENST00000316364 APLP2Q06481 763 aa18.76■□□□□ 0.59
SEMA6D-201ENST00000316364 HRCP23327 699 aa18.73■□□□□ 0.59
SEMA6D-201ENST00000316364 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
SEMA6D-201ENST00000316364 ZEB1P37275 1124 aaPredicted RBP18.52■□□□□ 0.56
SEMA6D-201ENST00000316364 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
SEMA6D-201ENST00000316364 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
SEMA6D-201ENST00000316364 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
SEMA6D-201ENST00000316364 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
SEMA6D-201ENST00000316364 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
SEMA6D-201ENST00000316364 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
SEMA6D-201ENST00000316364 PPARGC1BQ86YN6 1023 aaKnown RBP18.12■□□□□ 0.49
SEMA6D-201ENST00000316364 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
SEMA6D-201ENST00000316364 RANGAP1P46060 587 aaPredicted RBP18.09■□□□□ 0.49
SEMA6D-201ENST00000316364 CENPBP07199 599 aaPredicted RBP18.04■□□□□ 0.48
SEMA6D-201ENST00000316364 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
SEMA6D-201ENST00000316364 CCER1Q8TC90 406 aaPredicted RBP17.95■□□□□ 0.46
SEMA6D-201ENST00000316364 MYT1Q01538 1121 aa17.91■□□□□ 0.46
SEMA6D-201ENST00000316364 DCAF1Q9Y4B6 1507 aa17.9■□□□□ 0.46
SEMA6D-201ENST00000316364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
SEMA6D-201ENST00000316364 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
SEMA6D-201ENST00000316364 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
SEMA6D-201ENST00000316364 MYO15BQ96JP2 1530 aa17.73■□□□□ 0.43
SEMA6D-201ENST00000316364 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
SEMA6D-201ENST00000316364 CCDC180Q9P1Z9 1646 aa17.65■□□□□ 0.42
SEMA6D-201ENST00000316364 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
SEMA6D-201ENST00000316364 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
SEMA6D-201ENST00000316364 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
SEMA6D-201ENST00000316364 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
SEMA6D-201ENST00000316364 GTF3C3Q9Y5Q9 886 aa17.32■□□□□ 0.36
SEMA6D-201ENST00000316364 ERICH6Q7L0X2 663 aa17.28■□□□□ 0.36
SEMA6D-201ENST00000316364 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.35
SEMA6D-201ENST00000316364 FBLN2P98095 1184 aa17.25■□□□□ 0.35
SEMA6D-201ENST00000316364 POLR3GLQ9BT43 218 aa17.23■□□□□ 0.35
SEMA6D-201ENST00000316364 ZNF316A6NFI3 1004 aaPredicted RBP17.21■□□□□ 0.35
SEMA6D-201ENST00000316364 BCANQ96GW7 911 aa17.2■□□□□ 0.34
SEMA6D-201ENST00000316364 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
SEMA6D-201ENST00000316364 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
SEMA6D-201ENST00000316364 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
SEMA6D-201ENST00000316364 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEMA6D-201ENST00000316364 NEFLP07196 543 aa17.08■□□□□ 0.33
SEMA6D-201ENST00000316364 ITGAEP38570 1179 aa17.06■□□□□ 0.32
SEMA6D-201ENST00000316364 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
SEMA6D-201ENST00000316364 ABCC9O60706 1549 aa17.05■□□□□ 0.32
SEMA6D-201ENST00000316364 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
SEMA6D-201ENST00000316364 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.31
SEMA6D-201ENST00000316364 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
SEMA6D-201ENST00000316364 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
SEMA6D-201ENST00000316364 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
SEMA6D-201ENST00000316364 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
SEMA6D-201ENST00000316364 DAXXQ9UER7 740 aaPredicted RBP16.89■□□□□ 0.29
SEMA6D-201ENST00000316364 EEA1Q15075 1411 aa16.83■□□□□ 0.28
SEMA6D-201ENST00000316364 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
SEMA6D-201ENST00000316364 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
SEMA6D-201ENST00000316364 TRIM52Q96A61 297 aa16.79■□□□□ 0.28
SEMA6D-201ENST00000316364 CEP162Q5TB80 1403 aa16.79■□□□□ 0.28
SEMA6D-201ENST00000316364 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
SEMA6D-201ENST00000316364 NEFMP07197 916 aa16.75■□□□□ 0.27
SEMA6D-201ENST00000316364 MIER1Q8N108 512 aa16.74■□□□□ 0.27
SEMA6D-201ENST00000316364 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
SEMA6D-201ENST00000316364 FAM50AQ14320 339 aaKnown RBP16.7■□□□□ 0.26
SEMA6D-201ENST00000316364 NACADO15069 1562 aa16.68■□□□□ 0.26
SEMA6D-201ENST00000316364 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
SEMA6D-201ENST00000316364 CECR2Q9BXF3 1484 aa16.64■□□□□ 0.25
SEMA6D-201ENST00000316364 CLIP1P30622 1438 aa16.63■□□□□ 0.25
SEMA6D-201ENST00000316364 CDK11AQ9UQ88 783 aaPredicted RBP16.59■□□□□ 0.25
SEMA6D-201ENST00000316364 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
SEMA6D-201ENST00000316364 WRNQ14191 1432 aaPredicted RBP eCLIP16.56■□□□□ 0.24
SEMA6D-201ENST00000316364 ANP32CO43423 234 aa16.56■□□□□ 0.24
SEMA6D-201ENST00000316364 MROH2BQ7Z745 1585 aa16.55■□□□□ 0.24
SEMA6D-201ENST00000316364 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
SEMA6D-201ENST00000316364 A0A0G2JS52 829 aa16.52■□□□□ 0.24
SEMA6D-201ENST00000316364 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.24
SEMA6D-201ENST00000316364 CHGAP10645 457 aaKnown RBP16.52■□□□□ 0.23
SEMA6D-201ENST00000316364 ZNF777Q9ULD5 760 aaPredicted RBP16.51■□□□□ 0.23
SEMA6D-201ENST00000316364 ARID3CA6NKF2 412 aa16.5■□□□□ 0.23
SEMA6D-201ENST00000316364 SOGA1O94964 1423 aa16.46■□□□□ 0.23
SEMA6D-201ENST00000316364 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
SEMA6D-201ENST00000316364 FKBP8Q14318 412 aa16.43■□□□□ 0.22
SEMA6D-201ENST00000316364 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
SEMA6D-201ENST00000316364 C14orf37Q86TY3 774 aa16.42■□□□□ 0.22
SEMA6D-201ENST00000316364 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
SEMA6D-201ENST00000316364 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
SEMA6D-201ENST00000316364 ARID4BQ4LE39 1312 aaPredicted RBP16.4■□□□□ 0.22
SEMA6D-201ENST00000316364 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
SEMA6D-201ENST00000316364 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
SEMA6D-201ENST00000316364 SUPT16HQ9Y5B9 1047 aaKnown RBP16.35■□□□□ 0.21
SEMA6D-201ENST00000316364 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
SEMA6D-201ENST00000316364 ABCC8Q09428 1581 aa16.33■□□□□ 0.21
SEMA6D-201ENST00000316364 WIZO95785 1651 aa16.33■□□□□ 0.2
SEMA6D-201ENST00000316364 ANP32EQ9BTT0 268 aa16.33■□□□□ 0.2
SEMA6D-201ENST00000316364 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
SEMA6D-201ENST00000316364 P3H3Q8IVL6 736 aa16.31■□□□□ 0.2
SEMA6D-201ENST00000316364 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
SEMA6D-201ENST00000316364 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms