Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ATP6V1AP38606 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP6V1AP38606 AC055811.3-201ENST00000584952 686 ntBASIC18.45■□□□□ 0.54
ATP6V1AP38606 AC012073.1-201ENST00000606114 1108 ntBASIC18.45■□□□□ 0.54
ATP6V1AP38606 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ATP6V1AP38606 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.45■□□□□ 0.54
ATP6V1AP38606 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.45■□□□□ 0.54
ATP6V1AP38606 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6V1AP38606 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 RN7SL23P-201ENST00000484055 275 ntBASIC18.44■□□□□ 0.54
ATP6V1AP38606 FAM86B3P-203ENST00000523992 854 ntBASIC18.44■□□□□ 0.54
ATP6V1AP38606 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.44■□□□□ 0.54
ATP6V1AP38606 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP6V1AP38606 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 AL118516.1-201ENST00000564152 670 ntBASIC18.43■□□□□ 0.54
ATP6V1AP38606 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP6V1AP38606 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ATP6V1AP38606 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V1AP38606 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATP6V1AP38606 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
ATP6V1AP38606 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP6V1AP38606 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
ATP6V1AP38606 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms