Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCKBRP32239 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CCKBRP32239 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.1□□□□□ -0.15
CCKBRP32239 MROH4P-201ENST00000431302 1578 ntBASIC14.1□□□□□ -0.15
CCKBRP32239 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.1□□□□□ -0.15
CCKBRP32239 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.1□□□□□ -0.15
CCKBRP32239 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.1□□□□□ -0.15
CCKBRP32239 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.1□□□□□ -0.15
CCKBRP32239 FGFR3P1-201ENST00000449999 601 ntBASIC14.1□□□□□ -0.15
CCKBRP32239 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.1□□□□□ -0.15
CCKBRP32239 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.1□□□□□ -0.15
CCKBRP32239 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.1□□□□□ -0.15
CCKBRP32239 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.1□□□□□ -0.15
CCKBRP32239 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
CCKBRP32239 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.1□□□□□ -0.15
CCKBRP32239 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCKBRP32239 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.1□□□□□ -0.15
CCKBRP32239 AC073352.2-201ENST00000609385 439 ntBASIC14.1□□□□□ -0.15
CCKBRP32239 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.1□□□□□ -0.15
CCKBRP32239 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCKBRP32239 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.1□□□□□ -0.15
CCKBRP32239 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 AC126365.1-201ENST00000578585 1514 ntBASIC14.1□□□□□ -0.15
CCKBRP32239 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCKBRP32239 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.1□□□□□ -0.15
CCKBRP32239 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.1□□□□□ -0.15
CCKBRP32239 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 FAM90A2P-201ENST00000511144 1395 ntBASIC14.09□□□□□ -0.15
CCKBRP32239 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 FAM90A25P-201ENST00000528404 1395 ntBASIC14.09□□□□□ -0.15
CCKBRP32239 WASH3P-207ENST00000560956 1394 ntBASIC14.09□□□□□ -0.15
CCKBRP32239 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 AC138035.3-201ENST00000622706 2791 ntBASIC14.09□□□□□ -0.15
CCKBRP32239 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.09□□□□□ -0.15
CCKBRP32239 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.09□□□□□ -0.15
CCKBRP32239 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.09□□□□□ -0.15
CCKBRP32239 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 AC104784.1-201ENST00000473096 294 ntBASIC14.09□□□□□ -0.15
CCKBRP32239 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.09□□□□□ -0.15
CCKBRP32239 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.09□□□□□ -0.15
CCKBRP32239 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.09□□□□□ -0.15
CCKBRP32239 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCKBRP32239 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CCKBRP32239 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCKBRP32239 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms