Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC6A4P31645 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A4P31645 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A4P31645 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A4P31645 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SLC6A4P31645 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC6A4P31645 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC6A4P31645 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A4P31645 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A4P31645 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A4P31645 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A4P31645 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC6A4P31645 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A4P31645 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SLC6A4P31645 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A4P31645 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SLC6A4P31645 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC6A4P31645 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC6A4P31645 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC6A4P31645 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SLC6A4P31645 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC6A4P31645 KRT8P21-201ENST00000430398 1491 ntBASIC14.98□□□□□ -0.01
SLC6A4P31645 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A4P31645 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A4P31645 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SLC6A4P31645 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A4P31645 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SLC6A4P31645 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC6A4P31645 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC6A4P31645 AC024681.1-201ENST00000521917 487 ntBASIC14.98□□□□□ -0.01
SLC6A4P31645 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.98□□□□□ -0.01
SLC6A4P31645 PGAM1P5-201ENST00000548011 764 ntBASIC14.98□□□□□ -0.01
SLC6A4P31645 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SLC6A4P31645 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A4P31645 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.98□□□□□ -0.01
SLC6A4P31645 AC138627.1-207ENST00000641560 1006 ntBASIC14.98□□□□□ -0.01
SLC6A4P31645 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC6A4P31645 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
SLC6A4P31645 AC011498.7-201ENST00000624986 2027 ntBASIC14.98□□□□□ -0.01
SLC6A4P31645 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC6A4P31645 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC6A4P31645 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SLC6A4P31645 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SLC6A4P31645 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC6A4P31645 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC6A4P31645 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A4P31645 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
SLC6A4P31645 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SLC6A4P31645 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SLC6A4P31645 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SLC6A4P31645 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC6A4P31645 ISCA2P1-201ENST00000425548 448 ntBASIC14.97□□□□□ -0.01
SLC6A4P31645 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC6A4P31645 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A4P31645 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC6A4P31645 CHMP4BP1-201ENST00000556017 588 ntBASIC14.97□□□□□ -0.01
SLC6A4P31645 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC6A4P31645 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.97□□□□□ -0.01
SLC6A4P31645 AC124068.2-201ENST00000569473 1109 ntBASIC14.97□□□□□ -0.01
SLC6A4P31645 RN7SL574P-201ENST00000581512 297 ntBASIC14.97□□□□□ -0.01
SLC6A4P31645 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A4P31645 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.97□□□□□ -0.01
SLC6A4P31645 AL606495.2-201ENST00000605867 535 ntBASIC14.97□□□□□ -0.01
SLC6A4P31645 AC097724.1-201ENST00000609581 426 ntBASIC14.97□□□□□ -0.01
SLC6A4P31645 NAP1L6-202ENST00000641404 1222 ntBASIC14.97□□□□□ -0.01
SLC6A4P31645 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.97□□□□□ -0.01
SLC6A4P31645 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SLC6A4P31645 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 AC232323.1-201ENST00000540724 2099 ntBASIC14.97□□□□□ -0.01
SLC6A4P31645 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC6A4P31645 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.97□□□□□ -0.01
SLC6A4P31645 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SLC6A4P31645 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SLC6A4P31645 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SLC6A4P31645 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms