Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 AC134915.1-201ENST00000426461 574 ntBASIC12.6□□□□□ -0.39
CHATP28329 AC007969.1-201ENST00000433675 447 ntBASIC12.6□□□□□ -0.39
CHATP28329 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.6□□□□□ -0.39
CHATP28329 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.6□□□□□ -0.39
CHATP28329 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.6□□□□□ -0.39
CHATP28329 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.6□□□□□ -0.39
CHATP28329 AJ011932.1-201ENST00000621707 465 ntBASIC12.6□□□□□ -0.39
CHATP28329 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 RN7SL832P-201ENST00000607781 1756 ntBASIC12.6□□□□□ -0.39
CHATP28329 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 CR383656.2-201ENST00000548656 2254 ntBASIC12.6□□□□□ -0.39
CHATP28329 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.6□□□□□ -0.39
CHATP28329 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHATP28329 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.6□□□□□ -0.39
CHATP28329 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 AC003102.2-201ENST00000589195 1469 ntBASIC12.59□□□□□ -0.39
CHATP28329 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHATP28329 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 SPDYE19P-201ENST00000338590 713 ntBASIC12.59□□□□□ -0.39
CHATP28329 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 C1QBPP1-201ENST00000400117 770 ntBASIC12.59□□□□□ -0.39
CHATP28329 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.59□□□□□ -0.39
CHATP28329 AC114812.1-204ENST00000449669 728 ntBASIC12.59□□□□□ -0.39
CHATP28329 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.59□□□□□ -0.39
CHATP28329 AP001582.1-201ENST00000525856 295 ntBASIC12.59□□□□□ -0.39
CHATP28329 AC190387.1-201ENST00000551683 408 ntBASIC12.59□□□□□ -0.39
CHATP28329 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.59□□□□□ -0.39
CHATP28329 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHATP28329 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHATP28329 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHATP28329 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHATP28329 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CHATP28329 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHATP28329 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CHATP28329 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CHATP28329 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CHATP28329 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CHATP28329 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHATP28329 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHATP28329 AL136172.1-201ENST00000598590 1394 ntBASIC12.58□□□□□ -0.4
CHATP28329 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHATP28329 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.58□□□□□ -0.4
CHATP28329 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
CHATP28329 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms