Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.62□□□□□ -0.39
TNFSF4P23510 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 AC015818.8-201ENST00000587907 1519 ntBASIC12.62□□□□□ -0.39
TNFSF4P23510 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.62□□□□□ -0.39
TNFSF4P23510 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.62□□□□□ -0.39
TNFSF4P23510 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.62□□□□□ -0.39
TNFSF4P23510 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TNFSF4P23510 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.62□□□□□ -0.39
TNFSF4P23510 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 PFN1P12-201ENST00000455938 534 ntBASIC12.62□□□□□ -0.39
TNFSF4P23510 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.62□□□□□ -0.39
TNFSF4P23510 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.62□□□□□ -0.39
TNFSF4P23510 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TNFSF4P23510 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.62□□□□□ -0.39
TNFSF4P23510 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.62□□□□□ -0.39
TNFSF4P23510 BX088702.1-201ENST00000610784 235 ntBASIC12.62□□□□□ -0.39
TNFSF4P23510 AC009542.2-202ENST00000619004 1067 ntBASIC12.62□□□□□ -0.39
TNFSF4P23510 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TNFSF4P23510 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
TNFSF4P23510 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.62□□□□□ -0.39
TNFSF4P23510 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
TNFSF4P23510 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.62□□□□□ -0.39
TNFSF4P23510 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TNFSF4P23510 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TNFSF4P23510 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TNFSF4P23510 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 TNRC18P2-201ENST00000417666 2714 ntBASIC12.61□□□□□ -0.39
TNFSF4P23510 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TNFSF4P23510 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.61□□□□□ -0.39
TNFSF4P23510 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.61□□□□□ -0.39
TNFSF4P23510 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.61□□□□□ -0.39
TNFSF4P23510 INTS4P1-203ENST00000641008 3683 ntBASIC12.61□□□□□ -0.39
TNFSF4P23510 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.61□□□□□ -0.39
TNFSF4P23510 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.61□□□□□ -0.39
TNFSF4P23510 PUDPP3-201ENST00000445368 636 ntBASIC12.61□□□□□ -0.39
TNFSF4P23510 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.61□□□□□ -0.39
TNFSF4P23510 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.61□□□□□ -0.39
TNFSF4P23510 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.61□□□□□ -0.39
TNFSF4P23510 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.61□□□□□ -0.39
TNFSF4P23510 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.61□□□□□ -0.39
TNFSF4P23510 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.61□□□□□ -0.39
TNFSF4P23510 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.61□□□□□ -0.39
TNFSF4P23510 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.61□□□□□ -0.39
TNFSF4P23510 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TNFSF4P23510 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.61□□□□□ -0.39
TNFSF4P23510 CICP23-201ENST00000605013 2741 ntBASIC12.61□□□□□ -0.39
TNFSF4P23510 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TNFSF4P23510 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms