Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PRKCAP17252 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
PRKCAP17252 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
PRKCAP17252 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PRKCAP17252 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
PRKCAP17252 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 AL138709.1-201ENST00000614840 1693 ntBASIC13.7□□□□□ -0.22
PRKCAP17252 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PRKCAP17252 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PRKCAP17252 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.7□□□□□ -0.22
PRKCAP17252 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PRKCAP17252 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.7□□□□□ -0.22
PRKCAP17252 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 GAPDHP21-201ENST00000450301 1010 ntBASIC13.7□□□□□ -0.22
PRKCAP17252 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.7□□□□□ -0.22
PRKCAP17252 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.7□□□□□ -0.22
PRKCAP17252 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.7□□□□□ -0.22
PRKCAP17252 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.7□□□□□ -0.22
PRKCAP17252 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PRKCAP17252 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.7□□□□□ -0.22
PRKCAP17252 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PRKCAP17252 BTNL10-201ENST00000595971 695 ntBASIC13.7□□□□□ -0.22
PRKCAP17252 AL022328.1-201ENST00000610050 478 ntBASIC13.7□□□□□ -0.22
PRKCAP17252 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.7□□□□□ -0.22
PRKCAP17252 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.7□□□□□ -0.22
PRKCAP17252 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PRKCAP17252 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.7□□□□□ -0.22
PRKCAP17252 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PRKCAP17252 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
PRKCAP17252 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRKCAP17252 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.69□□□□□ -0.22
PRKCAP17252 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.69□□□□□ -0.22
PRKCAP17252 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 AC092933.1-201ENST00000393644 945 ntBASIC13.69□□□□□ -0.22
PRKCAP17252 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.69□□□□□ -0.22
PRKCAP17252 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 BCRP2-202ENST00000447763 634 ntBASIC13.69□□□□□ -0.22
PRKCAP17252 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
PRKCAP17252 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 BCRP6-201ENST00000510112 632 ntBASIC13.69□□□□□ -0.22
PRKCAP17252 BCRP7-201ENST00000511549 544 ntBASIC13.69□□□□□ -0.22
PRKCAP17252 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCAP17252 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCAP17252 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCAP17252 GNRHR2-203ENST00000581100 1187 ntBASIC13.69□□□□□ -0.22
PRKCAP17252 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.69□□□□□ -0.22
PRKCAP17252 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCAP17252 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
PRKCAP17252 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCAP17252 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
PRKCAP17252 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCAP17252 AC018665.1-201ENST00000622927 1362 ntBASIC13.69□□□□□ -0.22
PRKCAP17252 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PRKCAP17252 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCAP17252 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms