Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.51■□□□□ 0.39
CHGBP05060 CD164-210ENST00000512821 964 ntTSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 RN7SL774P-201ENST00000577467 290 ntBASIC17.51■□□□□ 0.39
CHGBP05060 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 MEG3_2.1-201ENST00000611456 105 ntBASIC17.51■□□□□ 0.39
CHGBP05060 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHGBP05060 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CHGBP05060 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHGBP05060 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 AC138028.6-201ENST00000616106 1482 ntBASIC17.5■□□□□ 0.39
CHGBP05060 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHGBP05060 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHGBP05060 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 LINC02486-201ENST00000604157 3000 ntBASIC17.5■□□□□ 0.39
CHGBP05060 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.5■□□□□ 0.39
CHGBP05060 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.5■□□□□ 0.39
CHGBP05060 AC125604.1-201ENST00000496255 707 ntBASIC17.5■□□□□ 0.39
CHGBP05060 RCC2P8-201ENST00000502779 1035 ntBASIC17.5■□□□□ 0.39
CHGBP05060 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.5■□□□□ 0.39
CHGBP05060 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.5■□□□□ 0.39
CHGBP05060 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.5■□□□□ 0.39
CHGBP05060 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHGBP05060 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CHGBP05060 AC020914.3-201ENST00000594712 304 ntBASIC17.5■□□□□ 0.39
CHGBP05060 AF254983.2-201ENST00000612331 135 ntBASIC17.5■□□□□ 0.39
CHGBP05060 AP000346.4-201ENST00000614827 381 ntBASIC17.5■□□□□ 0.39
CHGBP05060 AC138649.2-201ENST00000615886 705 ntBASIC17.5■□□□□ 0.39
CHGBP05060 AC133540.1-201ENST00000620845 1019 ntBASIC17.5■□□□□ 0.39
CHGBP05060 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHGBP05060 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.5■□□□□ 0.39
CHGBP05060 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CHGBP05060 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.5■□□□□ 0.39
CHGBP05060 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHGBP05060 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.49■□□□□ 0.39
CHGBP05060 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CHGBP05060 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.49■□□□□ 0.39
CHGBP05060 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.49■□□□□ 0.39
CHGBP05060 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CHGBP05060 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.49■□□□□ 0.39
CHGBP05060 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.49■□□□□ 0.39
CHGBP05060 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 FAM58BP-201ENST00000439056 645 ntBASIC17.49■□□□□ 0.39
CHGBP05060 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
CHGBP05060 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.49■□□□□ 0.39
CHGBP05060 SCARNA20.5-201ENST00000516991 142 ntBASIC17.49■□□□□ 0.39
CHGBP05060 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.49■□□□□ 0.39
CHGBP05060 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHGBP05060 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.49■□□□□ 0.39
CHGBP05060 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHGBP05060 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CHGBP05060 AL132994.2-201ENST00000603120 687 ntBASIC17.49■□□□□ 0.39
CHGBP05060 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.49■□□□□ 0.39
CHGBP05060 AL021578.1-201ENST00000613646 709 ntBASIC17.49■□□□□ 0.39
CHGBP05060 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms