Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC136621.1-201ENST00000624017 2304 ntBASIC15.53■□□□□ 0.08
TIMP1P01033 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TIMP1P01033 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 KRT18P62-201ENST00000446618 1287 ntBASIC15.53■□□□□ 0.08
TIMP1P01033 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.53■□□□□ 0.08
TIMP1P01033 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.53■□□□□ 0.08
TIMP1P01033 DLK1-205ENST00000556051 469 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 PTPN20CP-201ENST00000614090 920 ntBASIC15.53■□□□□ 0.08
TIMP1P01033 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC15.53■□□□□ 0.08
TIMP1P01033 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMP1P01033 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TIMP1P01033 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMP1P01033 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMP1P01033 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMP1P01033 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMP1P01033 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMP1P01033 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TIMP1P01033 PDXDC2P-206ENST00000534700 1315 ntBASIC15.52■□□□□ 0.08
TIMP1P01033 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TIMP1P01033 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 CCT8L1P-201ENST00000465400 1674 ntBASIC15.52■□□□□ 0.08
TIMP1P01033 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMP1P01033 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TIMP1P01033 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
TIMP1P01033 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMP1P01033 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 AC092570.1-201ENST00000414446 469 ntBASIC15.52■□□□□ 0.08
TIMP1P01033 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC15.52■□□□□ 0.08
TIMP1P01033 AP000244.1-201ENST00000424582 201 ntBASIC15.52■□□□□ 0.08
TIMP1P01033 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC15.52■□□□□ 0.08
TIMP1P01033 AC023141.7-201ENST00000430646 407 ntBASIC15.52■□□□□ 0.08
TIMP1P01033 AC092573.1-201ENST00000433054 884 ntBASIC15.52■□□□□ 0.08
TIMP1P01033 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMP1P01033 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TIMP1P01033 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMP1P01033 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 AC100858.1-201ENST00000514059 1228 ntBASIC15.52■□□□□ 0.08
TIMP1P01033 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC15.52■□□□□ 0.08
TIMP1P01033 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.52■□□□□ 0.08
TIMP1P01033 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.52■□□□□ 0.08
TIMP1P01033 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.52■□□□□ 0.07
TIMP1P01033 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.52■□□□□ 0.07
TIMP1P01033 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
TIMP1P01033 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TIMP1P01033 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.52■□□□□ 0.07
TIMP1P01033 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.52■□□□□ 0.07
TIMP1P01033 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TIMP1P01033 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.52■□□□□ 0.07
TIMP1P01033 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 AL365181.1-201ENST00000564032 1828 ntBASIC15.52■□□□□ 0.07
TIMP1P01033 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TIMP1P01033 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TIMP1P01033 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
TIMP1P01033 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TIMP1P01033 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TIMP1P01033 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TIMP1P01033 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TIMP1P01033 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.51■□□□□ 0.07
TIMP1P01033 GEMIN8P4-201ENST00000380526 729 ntBASIC15.51■□□□□ 0.07
TIMP1P01033 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.51■□□□□ 0.07
TIMP1P01033 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms