Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCNKO75909 AC097359.3-201ENST00000603982 1210 ntBASIC12.75□□□□□ -0.37
CCNKO75909 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.75□□□□□ -0.37
CCNKO75909 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CCNKO75909 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CCNKO75909 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.75□□□□□ -0.37
CCNKO75909 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CCNKO75909 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCNKO75909 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCNKO75909 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CCNKO75909 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.74□□□□□ -0.37
CCNKO75909 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 AC073439.1-201ENST00000624121 1774 ntBASIC12.74□□□□□ -0.37
CCNKO75909 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.74□□□□□ -0.37
CCNKO75909 AC112176.1-201ENST00000565428 3024 ntBASIC12.74□□□□□ -0.37
CCNKO75909 AP002414.3-201ENST00000589352 1468 ntBASIC12.74□□□□□ -0.37
CCNKO75909 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.74□□□□□ -0.37
CCNKO75909 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.74□□□□□ -0.37
CCNKO75909 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 AF238378.1-201ENST00000526806 358 ntBASIC12.74□□□□□ -0.37
CCNKO75909 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.74□□□□□ -0.37
CCNKO75909 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.74□□□□□ -0.37
CCNKO75909 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.74□□□□□ -0.37
CCNKO75909 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.74□□□□□ -0.37
CCNKO75909 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.74□□□□□ -0.37
CCNKO75909 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CCNKO75909 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CCNKO75909 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 AC115284.2-201ENST00000624646 2054 ntBASIC12.74□□□□□ -0.37
CCNKO75909 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CCNKO75909 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.74□□□□□ -0.37
CCNKO75909 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CCNKO75909 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.73□□□□□ -0.37
CCNKO75909 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.73□□□□□ -0.37
CCNKO75909 AC010336.1-201ENST00000539278 4739 ntBASIC12.73□□□□□ -0.37
CCNKO75909 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.73□□□□□ -0.37
CCNKO75909 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.73□□□□□ -0.37
CCNKO75909 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.73□□□□□ -0.37
CCNKO75909 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.73□□□□□ -0.37
CCNKO75909 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CCNKO75909 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.73□□□□□ -0.37
CCNKO75909 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CCNKO75909 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.73□□□□□ -0.37
CCNKO75909 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCNKO75909 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CCNKO75909 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.73□□□□□ -0.37
CCNKO75909 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CCNKO75909 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.73□□□□□ -0.37
CCNKO75909 AL513480.1-201ENST00000451731 511 ntBASIC12.73□□□□□ -0.37
CCNKO75909 CXCL1P1-201ENST00000502804 216 ntBASIC12.73□□□□□ -0.37
CCNKO75909 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.73□□□□□ -0.37
CCNKO75909 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.73□□□□□ -0.37
CCNKO75909 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.73□□□□□ -0.37
CCNKO75909 AL031432.2-201ENST00000566714 459 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms