Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 AC090505.1-201ENST00000430515 1834 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.15□□□□□ -0.3
ZIC3O60481 AC011498.7-201ENST00000624986 2027 ntBASIC13.15□□□□□ -0.3
ZIC3O60481 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZIC3O60481 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.14□□□□□ -0.31
ZIC3O60481 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.14□□□□□ -0.31
ZIC3O60481 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.14□□□□□ -0.31
ZIC3O60481 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.14□□□□□ -0.31
ZIC3O60481 CYP46A4P-201ENST00000414953 267 ntBASIC13.14□□□□□ -0.31
ZIC3O60481 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.14□□□□□ -0.31
ZIC3O60481 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.14□□□□□ -0.31
ZIC3O60481 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.14□□□□□ -0.31
ZIC3O60481 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.14□□□□□ -0.31
ZIC3O60481 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 PGAM1P5-201ENST00000548011 764 ntBASIC13.14□□□□□ -0.31
ZIC3O60481 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.14□□□□□ -0.31
ZIC3O60481 ACTG1P17-201ENST00000558391 1119 ntBASIC13.14□□□□□ -0.31
ZIC3O60481 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.14□□□□□ -0.31
ZIC3O60481 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.14□□□□□ -0.31
ZIC3O60481 AC124068.2-201ENST00000569473 1109 ntBASIC13.14□□□□□ -0.31
ZIC3O60481 AC092299.1-201ENST00000632679 757 ntBASIC13.14□□□□□ -0.31
ZIC3O60481 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.14□□□□□ -0.31
ZIC3O60481 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ZIC3O60481 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.14□□□□□ -0.31
ZIC3O60481 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.14□□□□□ -0.31
ZIC3O60481 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZIC3O60481 AHCYP4-201ENST00000419201 1315 ntBASIC13.13□□□□□ -0.31
ZIC3O60481 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 AC018629.1-201ENST00000623381 1736 ntBASIC13.13□□□□□ -0.31
ZIC3O60481 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
ZIC3O60481 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 AC005912.2-201ENST00000619492 2400 ntBASIC13.13□□□□□ -0.31
ZIC3O60481 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.13□□□□□ -0.31
ZIC3O60481 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.13□□□□□ -0.31
ZIC3O60481 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ZIC3O60481 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.13□□□□□ -0.31
ZIC3O60481 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 SPTLC1P5-201ENST00000450718 252 ntBASIC13.13□□□□□ -0.31
ZIC3O60481 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZIC3O60481 RCC2P8-201ENST00000502779 1035 ntBASIC13.13□□□□□ -0.31
ZIC3O60481 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.13□□□□□ -0.31
ZIC3O60481 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ZIC3O60481 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms