Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNRC18O15417 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNRC18O15417 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TNRC18O15417 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNRC18O15417 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNRC18O15417 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC15.14■□□□□ 0.01
TNRC18O15417 AL356583.3-201ENST00000412354 417 ntBASIC15.14■□□□□ 0.01
TNRC18O15417 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC15.14■□□□□ 0.01
TNRC18O15417 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC15.14■□□□□ 0.01
TNRC18O15417 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNRC18O15417 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC15.14■□□□□ 0.01
TNRC18O15417 GH2-205ENST00000622506 702 ntTSL 5 BASIC15.14■□□□□ 0.01
TNRC18O15417 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TNRC18O15417 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TNRC18O15417 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TNRC18O15417 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC15.13■□□□□ 0.01
TNRC18O15417 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 AC116347.1-201ENST00000442824 720 ntBASIC15.13■□□□□ 0.01
TNRC18O15417 AL391822.1-201ENST00000452580 562 ntBASIC15.13■□□□□ 0.01
TNRC18O15417 AC090825.2-201ENST00000557959 739 ntBASIC15.13■□□□□ 0.01
TNRC18O15417 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TNRC18O15417 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.13■□□□□ 0.01
TNRC18O15417 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.13■□□□□ 0.01
TNRC18O15417 AKR1B1P4-201ENST00000426552 922 ntBASIC15.13■□□□□ 0.01
TNRC18O15417 RPL13AP5-201ENST00000439189 612 ntBASIC15.13■□□□□ 0.01
TNRC18O15417 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC15.13■□□□□ 0.01
TNRC18O15417 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TNRC18O15417 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC15.13■□□□□ 0.01
TNRC18O15417 SRP9-205ENST00000626563 329 ntTSL 5 BASIC15.13■□□□□ 0.01
TNRC18O15417 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.13■□□□□ 0.01
TNRC18O15417 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TNRC18O15417 AC034205.3-201ENST00000603595 1376 ntBASIC15.13■□□□□ 0.01
TNRC18O15417 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.13■□□□□ 0.01
TNRC18O15417 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.12■□□□□ 0.01
TNRC18O15417 AC079944.2-201ENST00000478867 734 ntBASIC15.12■□□□□ 0.01
TNRC18O15417 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.12■□□□□ 0.01
TNRC18O15417 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC15.12■□□□□ 0.01
TNRC18O15417 RAB42P1-201ENST00000555078 316 ntBASIC15.12■□□□□ 0.01
TNRC18O15417 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.12■□□□□ 0.01
TNRC18O15417 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.12■□□□□ 0.01
TNRC18O15417 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TNRC18O15417 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.12■□□□□ 0.01
TNRC18O15417 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC15.12■□□□□ 0.01
TNRC18O15417 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 AC132825.4-202ENST00000578792 434 ntBASIC15.12■□□□□ 0.01
TNRC18O15417 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.12■□□□□ 0.01
TNRC18O15417 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 AC010491.1-201ENST00000563101 2797 ntBASIC15.12■□□□□ 0.01
TNRC18O15417 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TNRC18O15417 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 PMF1-201ENST00000368273 884 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TNRC18O15417 AP001331.1-201ENST00000413008 1015 ntBASIC15.12■□□□□ 0.01
TNRC18O15417 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC15.12■□□□□ 0.01
TNRC18O15417 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 AC069366.2-201ENST00000583643 430 ntBASIC15.12■□□□□ 0.01
TNRC18O15417 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TNRC18O15417 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
TNRC18O15417 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TNRC18O15417 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms