Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
UPK2O00526 AL138709.1-201ENST00000614840 1693 ntBASIC11.8□□□□□ -0.52
UPK2O00526 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
UPK2O00526 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
UPK2O00526 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
UPK2O00526 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.8□□□□□ -0.52
UPK2O00526 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.8□□□□□ -0.52
UPK2O00526 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.8□□□□□ -0.52
UPK2O00526 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
UPK2O00526 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UPK2O00526 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK2O00526 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 DMBT1P1-203ENST00000636837 4628 ntBASIC11.79□□□□□ -0.52
UPK2O00526 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
UPK2O00526 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
UPK2O00526 AC236430.1-201ENST00000402231 743 ntBASIC11.79□□□□□ -0.52
UPK2O00526 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 RN7SKP175-201ENST00000408472 289 ntBASIC11.79□□□□□ -0.52
UPK2O00526 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.79□□□□□ -0.52
UPK2O00526 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 AC002472.2-201ENST00000442739 958 ntBASIC11.79□□□□□ -0.52
UPK2O00526 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK2O00526 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 AC068587.3-201ENST00000526613 355 ntBASIC11.79□□□□□ -0.52
UPK2O00526 TDH-203ENST00000531764 1110 ntBASIC11.79□□□□□ -0.52
UPK2O00526 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC11.79□□□□□ -0.52
UPK2O00526 AC190387.1-201ENST00000551683 408 ntBASIC11.79□□□□□ -0.52
UPK2O00526 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.79□□□□□ -0.52
UPK2O00526 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC11.79□□□□□ -0.52
UPK2O00526 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.79□□□□□ -0.52
UPK2O00526 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
UPK2O00526 AL096865.1-201ENST00000606796 927 ntBASIC11.79□□□□□ -0.52
UPK2O00526 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.79□□□□□ -0.52
UPK2O00526 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
UPK2O00526 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK2O00526 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
UPK2O00526 AC090643.2-201ENST00000623442 2029 ntBASIC11.79□□□□□ -0.52
UPK2O00526 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.79□□□□□ -0.52
UPK2O00526 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
UPK2O00526 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.78□□□□□ -0.52
UPK2O00526 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UPK2O00526 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
UPK2O00526 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms