Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHISA3A0PJX4 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.8□□□□□ -0.36
SHISA3A0PJX4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.8□□□□□ -0.36
SHISA3A0PJX4 AC073869.1-201ENST00000415574 2762 ntBASIC12.8□□□□□ -0.36
SHISA3A0PJX4 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHISA3A0PJX4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SHISA3A0PJX4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
SHISA3A0PJX4 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.8□□□□□ -0.36
SHISA3A0PJX4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHISA3A0PJX4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AP003969.2-201ENST00000623739 2275 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AC136604.1-202ENST00000425471 771 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 FAM86LP-201ENST00000478302 853 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 SPDYE22P-201ENST00000582158 798 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 BX539320.1-201ENST00000623759 877 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AC004840.1-201ENST00000636359 365 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AL445250.1-201ENST00000641671 2259 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AC087499.5-201ENST00000452760 1342 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 VENTXP1-201ENST00000569334 2716 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 AC004623.1-201ENST00000624592 2127 ntBASIC12.79□□□□□ -0.36
SHISA3A0PJX4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHISA3A0PJX4 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 MKRN5P-201ENST00000445263 1467 ntBASIC12.78□□□□□ -0.36
SHISA3A0PJX4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 AL590440.2-201ENST00000641973 1595 ntBASIC12.78□□□□□ -0.36
SHISA3A0PJX4 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHISA3A0PJX4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms