Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DRB4X5D2U9 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
HLA-DRB4X5D2U9 AC011474.4-201ENST00000623523 2076 ntBASIC11.15□□□□□ -0.63
HLA-DRB4X5D2U9 MSTO2P-201ENST00000314835 1709 ntBASIC11.15□□□□□ -0.63
HLA-DRB4X5D2U9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.15□□□□□ -0.63
HLA-DRB4X5D2U9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AC007969.1-201ENST00000433675 447 ntBASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AP005018.1-201ENST00000525475 301 ntBASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 AC145423.3-201ENST00000615987 467 ntBASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 CICP8-201ENST00000455800 2813 ntBASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HLA-DRB4X5D2U9 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
HLA-DRB4X5D2U9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms