Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR1DQ9Y2S0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 MAPK10-262ENST00000641051 5738 ntBASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 ACKR1-201ENST00000368121 1240 ntBASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 EIF3FP3-201ENST00000434851 1086 ntBASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 CLUHP6-201ENST00000580789 941 ntBASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
POLR1DQ9Y2S0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
POLR1DQ9Y2S0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.21□□□□□ -0.3
POLR1DQ9Y2S0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
POLR1DQ9Y2S0 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
POLR1DQ9Y2S0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
POLR1DQ9Y2S0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
POLR1DQ9Y2S0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
POLR1DQ9Y2S0 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
POLR1DQ9Y2S0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 AP006294.1-201ENST00000415407 339 ntBASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 TLE1P1-201ENST00000422965 589 ntBASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 PTP4A1P2-201ENST00000546033 454 ntBASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 AL354702.1-201ENST00000442006 1960 ntBASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
POLR1DQ9Y2S0 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
POLR1DQ9Y2S0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms