Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 SLC29A3-201ENST00000373189 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 PMF1-201ENST00000368273 884 ntTSL 2 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 AC008267.3-201ENST00000448776 712 ntBASIC22.12■■□□□ 1.13
RIMBP3Q9UFD9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 AC015688.4-201ENST00000580780 1647 ntBASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 SNU13-204ENST00000402458 462 ntTSL 3 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 MIR941-1-201ENST00000636396 72 ntBASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 FKBP4P7-201ENST00000433874 1363 ntBASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RIMBP3Q9UFD9 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 HMGN1P4-201ENST00000419500 290 ntBASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 AP001102.1-201ENST00000528959 409 ntBASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 AC005586.2-201ENST00000563946 837 ntBASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 MIR378I-201ENST00000582688 76 ntBASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 BIN3-212ENST00000640731 450 ntTSL 5 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 CICP13-201ENST00000422015 2789 ntBASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 KRT18P40-201ENST00000599859 1571 ntBASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
RIMBP3Q9UFD9 AL049542.1-201ENST00000430231 278 ntBASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 RN7SL2-201ENST00000490232 300 ntBASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 AC067942.2-201ENST00000506227 1268 ntBASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 RN7SL4P-201ENST00000584058 295 ntBASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC22.09■■□□□ 1.13
RIMBP3Q9UFD9 AC105443.1-201ENST00000433754 712 ntBASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms