Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 TBC1D3P2-202ENST00000577902 1649 ntBASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 LMOD3-202ENST00000475434 2238 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 PIK3CD-207ENST00000543390 3503 ntTSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 LINC02486-201ENST00000604157 3000 ntBASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 AL513497.1-201ENST00000624273 2083 ntBASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 NR2F1-AS1-213ENST00000607797 3380 ntTSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SLC22A14-202ENST00000448498 1827 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 CTSK-201ENST00000271651 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 ARHGAP36-206ENST00000639280 2685 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 HIST1H3G-201ENST00000614378 2411 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 ABCD1P2-201ENST00000429313 1601 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 NGRN-202ENST00000379095 7237 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 PCGF2-207ENST00000620225 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 RANBP3-203ENST00000439268 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AL445531.1-201ENST00000562653 1728 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AC068299.1-201ENST00000624716 1749 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 LINC01254-201ENST00000566225 2908 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 MAGEC3-201ENST00000298296 1932 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AL355482.1-201ENST00000411509 2463 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 RTEL1P1-201ENST00000504490 3685 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 GOLGA6L10-208ENST00000619556 4306 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 PCDHGB8P-202ENST00000507007 2873 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 AC008764.8-201ENST00000623966 2717 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 GOLGA8EP-201ENST00000530246 1959 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 HERC2P2-201ENST00000613386 5181 ntBASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 MRVI1-214ENST00000534266 2824 ntTSL 2 BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
CDC42SE1Q9NRR8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC7.27□□□□□ -1.24
CDC42SE1Q9NRR8 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
CDC42SE1Q9NRR8 DIS3L2-201ENST00000273009 3201 ntTSL 2 BASIC7.27□□□□□ -1.24
CDC42SE1Q9NRR8 GRK1-201ENST00000335678 4296 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms