Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
VGLL1Q99990 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
VGLL1Q99990 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
VGLL1Q99990 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
VGLL1Q99990 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.22□□□□□ -0.61
VGLL1Q99990 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 AL139094.1-201ENST00000405549 1188 ntBASIC11.22□□□□□ -0.61
VGLL1Q99990 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC11.22□□□□□ -0.61
VGLL1Q99990 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.22□□□□□ -0.61
VGLL1Q99990 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.22□□□□□ -0.61
VGLL1Q99990 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.22□□□□□ -0.61
VGLL1Q99990 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 AC026434.2-201ENST00000506094 1078 ntBASIC11.22□□□□□ -0.61
VGLL1Q99990 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 DUX4L27-201ENST00000554796 1261 ntBASIC11.22□□□□□ -0.61
VGLL1Q99990 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.22□□□□□ -0.61
VGLL1Q99990 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.22□□□□□ -0.61
VGLL1Q99990 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 DUX4L47-201ENST00000566374 394 ntBASIC11.22□□□□□ -0.61
VGLL1Q99990 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 AL390754.1-201ENST00000619088 582 ntBASIC11.22□□□□□ -0.61
VGLL1Q99990 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.22□□□□□ -0.61
VGLL1Q99990 PRSS30P-206ENST00000641773 873 ntBASIC11.22□□□□□ -0.61
VGLL1Q99990 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
VGLL1Q99990 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
VGLL1Q99990 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.21□□□□□ -0.61
VGLL1Q99990 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.21□□□□□ -0.61
VGLL1Q99990 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.21□□□□□ -0.61
VGLL1Q99990 SALL4P5-201ENST00000419001 1760 ntBASIC11.21□□□□□ -0.61
VGLL1Q99990 RN7SL832P-201ENST00000607781 1756 ntBASIC11.21□□□□□ -0.61
VGLL1Q99990 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.21□□□□□ -0.61
VGLL1Q99990 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
VGLL1Q99990 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
VGLL1Q99990 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms