Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN18Q99952 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN18Q99952 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN18Q99952 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 KRT8P18-201ENST00000413425 1445 ntBASIC16.46■□□□□ 0.23
PTPN18Q99952 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN18Q99952 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 AC106827.1-201ENST00000366454 431 ntBASIC16.46■□□□□ 0.23
PTPN18Q99952 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN18Q99952 AC092570.1-201ENST00000414446 469 ntBASIC16.46■□□□□ 0.23
PTPN18Q99952 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN18Q99952 ASS1P2-201ENST00000439895 1223 ntBASIC16.46■□□□□ 0.23
PTPN18Q99952 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN18Q99952 RPL3P5-201ENST00000441645 1232 ntBASIC16.46■□□□□ 0.23
PTPN18Q99952 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC16.46■□□□□ 0.23
PTPN18Q99952 IGHEP1-201ENST00000521393 651 ntBASIC16.46■□□□□ 0.23
PTPN18Q99952 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
PTPN18Q99952 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN18Q99952 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN18Q99952 AC018846.1-201ENST00000568231 183 ntBASIC16.46■□□□□ 0.23
PTPN18Q99952 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN18Q99952 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.46■□□□□ 0.23
PTPN18Q99952 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN18Q99952 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN18Q99952 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN18Q99952 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PTPN18Q99952 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN18Q99952 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN18Q99952 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PTPN18Q99952 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN18Q99952 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
PTPN18Q99952 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN18Q99952 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PTPN18Q99952 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PTPN18Q99952 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN18Q99952 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN18Q99952 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN18Q99952 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 TMBIM7P-203ENST00000641617 1718 ntBASIC16.45■□□□□ 0.22
PTPN18Q99952 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.45■□□□□ 0.22
PTPN18Q99952 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PTPN18Q99952 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PTPN18Q99952 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN18Q99952 BX679664.3-201ENST00000414070 555 ntBASIC16.45■□□□□ 0.22
PTPN18Q99952 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN18Q99952 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC16.45■□□□□ 0.22
PTPN18Q99952 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN18Q99952 STK24P1-201ENST00000455035 1291 ntBASIC16.45■□□□□ 0.22
PTPN18Q99952 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 AC113935.1-201ENST00000471722 555 ntBASIC16.45■□□□□ 0.22
PTPN18Q99952 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN18Q99952 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN18Q99952 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN18Q99952 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN18Q99952 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.45■□□□□ 0.22
PTPN18Q99952 PTPN20CP-201ENST00000614090 920 ntBASIC16.45■□□□□ 0.22
PTPN18Q99952 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.45■□□□□ 0.22
PTPN18Q99952 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.45■□□□□ 0.22
PTPN18Q99952 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN18Q99952 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.45■□□□□ 0.22
PTPN18Q99952 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
PTPN18Q99952 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN18Q99952 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN18Q99952 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN18Q99952 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN18Q99952 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN18Q99952 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN18Q99952 PDXDC2P-206ENST00000534700 1315 ntBASIC16.45■□□□□ 0.22
PTPN18Q99952 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN18Q99952 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PTPN18Q99952 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN18Q99952 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PTPN18Q99952 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.44■□□□□ 0.22
PTPN18Q99952 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms