Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AP005482.1-201ENST00000563722 1273 ntBASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 MIR4741-201ENST00000579822 90 ntBASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 MIR4783-201ENST00000580343 82 ntBASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 MIR4259-201ENST00000584466 101 ntBASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AC009955.4-201ENST00000597192 544 ntBASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 COX11-210ENST00000639671 696 ntBASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 AC064801.2-201ENST00000625052 1303 ntBASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.11■□□□□ 0.01
CSPG4P5Q96PW8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 AC079178.1-201ENST00000420915 656 ntBASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 AL161932.2-201ENST00000435436 679 ntBASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 YBX1P6-201ENST00000442962 1002 ntBASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 DUX4L45-201ENST00000566406 1057 ntBASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 AC133552.6-201ENST00000613406 534 ntBASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 TMBIM7P-202ENST00000641474 1516 ntBASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 AC097376.2-205ENST00000610159 5334 ntBASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSPG4P5Q96PW8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CSPG4P5Q96PW8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms