Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 PRSS30P-206ENST00000641773 873 ntBASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 AL157996.1-201ENST00000624684 2299 ntBASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.92□□□□□ -0.18
NSMCE2Q96MF7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AC026434.2-201ENST00000506094 1078 ntBASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AC022616.1-201ENST00000518688 554 ntBASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AL391069.4-201ENST00000609583 481 ntBASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 BX539320.1-201ENST00000623759 877 ntBASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AC003102.2-201ENST00000589195 1469 ntBASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AC072061.1-201ENST00000569710 2234 ntBASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 AC068760.1-201ENST00000493579 1953 ntBASIC13.91□□□□□ -0.18
NSMCE2Q96MF7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NSMCE2Q96MF7 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms