Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 AC005695.3-201ENST00000614522 232 ntBASIC17.5■□□□□ 0.39
DDX11Q96FC9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX11Q96FC9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
DDX11Q96FC9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 CNN2P10-201ENST00000443067 918 ntBASIC17.49■□□□□ 0.39
DDX11Q96FC9 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 AP006547.1-201ENST00000563435 692 ntBASIC17.49■□□□□ 0.39
DDX11Q96FC9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 AC244452.3-201ENST00000636814 210 ntBASIC17.49■□□□□ 0.39
DDX11Q96FC9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX11Q96FC9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX11Q96FC9 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
DDX11Q96FC9 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX11Q96FC9 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms