Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 TCAM1P-207ENST00000485295 1537 ntBASIC12.77□□□□□ -0.37
BEST4Q8NFU0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
BEST4Q8NFU0 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 ALG1L5P-201ENST00000482043 771 ntBASIC12.76□□□□□ -0.37
BEST4Q8NFU0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 AC026150.2-201ENST00000564693 1156 ntBASIC12.76□□□□□ -0.37
BEST4Q8NFU0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 LINC01115-203ENST00000606068 577 ntBASIC12.76□□□□□ -0.37
BEST4Q8NFU0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 AC020910.6-201ENST00000623084 1459 ntBASIC12.76□□□□□ -0.37
BEST4Q8NFU0 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 AGAP10P-201ENST00000454844 2418 ntBASIC12.76□□□□□ -0.37
BEST4Q8NFU0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BEST4Q8NFU0 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
BEST4Q8NFU0 MIR940-201ENST00000401276 94 ntBASIC12.75□□□□□ -0.37
BEST4Q8NFU0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms