Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 AL590440.2-201ENST00000641973 1595 ntBASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 TPM3P8-201ENST00000330554 643 ntBASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 RN7SKP175-201ENST00000408472 289 ntBASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 RN7SL837P-201ENST00000463010 287 ntBASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 RN7SL752P-201ENST00000463779 287 ntBASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 AC025048.6-201ENST00000634326 1161 ntBASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 AL928921.2-201ENST00000641325 2442 ntBASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LSMEM1Q8N8F7 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 LINC01230-201ENST00000625222 3017 ntBASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 CD8B2-202ENST00000417670 633 ntBASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 PUDPP3-201ENST00000445368 636 ntBASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AL391280.1-201ENST00000506969 1062 ntBASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 RNA5SP486-201ENST00000515961 83 ntBASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AC106820.3-201ENST00000561653 397 ntBASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AC016397.2-201ENST00000624848 1985 ntBASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LSMEM1Q8N8F7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms