Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VRK2Q86Y07 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
VRK2Q86Y07 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 PUDPP3-201ENST00000445368 636 ntBASIC13.6□□□□□ -0.23
VRK2Q86Y07 AC007389.4-201ENST00000454674 793 ntBASIC13.6□□□□□ -0.23
VRK2Q86Y07 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 AP003171.2-201ENST00000528208 925 ntBASIC13.6□□□□□ -0.23
VRK2Q86Y07 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 OR10B1P-201ENST00000601666 907 ntBASIC13.6□□□□□ -0.23
VRK2Q86Y07 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 AC132938.4-201ENST00000623835 848 ntBASIC13.6□□□□□ -0.23
VRK2Q86Y07 AL590440.2-201ENST00000641973 1595 ntBASIC13.6□□□□□ -0.23
VRK2Q86Y07 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VRK2Q86Y07 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VRK2Q86Y07 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 AL359881.3-201ENST00000602640 1721 ntBASIC13.59□□□□□ -0.23
VRK2Q86Y07 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 AC005229.1-201ENST00000392885 409 ntBASIC13.59□□□□□ -0.23
VRK2Q86Y07 AC092933.1-201ENST00000393644 945 ntBASIC13.59□□□□□ -0.23
VRK2Q86Y07 TMEM14DP-201ENST00000422205 345 ntBASIC13.59□□□□□ -0.23
VRK2Q86Y07 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 INE1-201ENST00000456273 945 ntBASIC13.59□□□□□ -0.23
VRK2Q86Y07 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 USP32P1-208ENST00000506594 1164 ntBASIC13.59□□□□□ -0.23
VRK2Q86Y07 SORD2P-201ENST00000558556 1069 ntBASIC13.59□□□□□ -0.23
VRK2Q86Y07 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VRK2Q86Y07 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VRK2Q86Y07 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms