Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NUP54Q7Z3B4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 BTBD6P1-201ENST00000412176 1267 ntBASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 AL035414.1-201ENST00000451327 857 ntBASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 RPL13AP20-201ENST00000459725 609 ntBASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 AC100850.1-201ENST00000506768 649 ntBASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 AP001002.3-201ENST00000623482 206 ntBASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NUP54Q7Z3B4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 GRK6P1-201ENST00000400595 1711 ntBASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 SHC1P1-201ENST00000425230 1745 ntBASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 AC010141.1-201ENST00000411585 623 ntBASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 MTX1P1-201ENST00000440904 838 ntBASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 AC027601.3-201ENST00000622907 509 ntBASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP54Q7Z3B4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms