Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 MIR4746-201ENST00000579802 71 ntBASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 NEK4P3-201ENST00000604859 544 ntBASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTF1AQ7RTS3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 CCT8L1P-201ENST00000465400 1674 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 AC117503.4-201ENST00000623229 1418 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 FAU-201ENST00000279259 461 ntTSL 2 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 AL121949.3-201ENST00000406684 385 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 AHCYP3-201ENST00000420053 1279 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 MAGEA7P-201ENST00000436482 942 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 AL359219.1-201ENST00000556311 934 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 SRP14-208ENST00000560773 468 ntTSL 3 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 AC079414.2-201ENST00000567157 1104 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 RN7SL455P-201ENST00000580629 282 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 URAHP-205ENST00000610227 398 ntBASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PTF1AQ7RTS3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 AC007952.5-201ENST00000572818 1486 ntBASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 PRMT1P1-201ENST00000604252 1009 ntBASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 PHF23-213ENST00000613632 850 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.34■□□□□ 0.53
PTF1AQ7RTS3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms