Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 RNA5SP359-201ENST00000364838 113 ntBASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 AC027601.3-201ENST00000622907 509 ntBASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
OTOP1Q7RTM1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC018442.1-201ENST00000421439 2061 ntBASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 XBP1P1-201ENST00000436573 652 ntBASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC244197.1-201ENST00000456494 951 ntBASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC012073.1-201ENST00000606114 1108 ntBASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
OTOP1Q7RTM1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 TNRC18P2-201ENST00000417666 2714 ntBASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
OTOP1Q7RTM1 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms