Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 MIR1202-201ENST00000408529 83 ntBASIC17.56■□□□□ 0.4
RNF20Q5VTR2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.56■□□□□ 0.4
RNF20Q5VTR2 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 AC106886.1-201ENST00000568660 600 ntBASIC17.56■□□□□ 0.4
RNF20Q5VTR2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 LINC02084-201ENST00000606069 1096 ntBASIC17.56■□□□□ 0.4
RNF20Q5VTR2 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.56■□□□□ 0.4
RNF20Q5VTR2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 AC009093.10-201ENST00000641956 1442 ntBASIC17.55■□□□□ 0.4
RNF20Q5VTR2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 CTBP1-AS2-206ENST00000581398 5652 ntBASIC17.55■□□□□ 0.4
RNF20Q5VTR2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 RPL7P3-201ENST00000441388 714 ntBASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AL355994.2-201ENST00000447882 704 ntBASIC17.55■□□□□ 0.4
RNF20Q5VTR2 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AC011498.7-201ENST00000624986 2027 ntBASIC17.55■□□□□ 0.4
RNF20Q5VTR2 AC020910.6-201ENST00000623084 1459 ntBASIC17.55■□□□□ 0.4
RNF20Q5VTR2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RNF20Q5VTR2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 KRT8P28-201ENST00000433288 1390 ntBASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC012617.1-204ENST00000586340 2305 ntBASIC17.54■□□□□ 0.4
RNF20Q5VTR2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF20Q5VTR2 AC112492.5-201ENST00000421897 457 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms