Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDK3Q00526 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDK3Q00526 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK3Q00526 OR2R1P-201ENST00000441404 914 ntBASIC14.38□□□□□ -0.11
CDK3Q00526 TPT1P11-201ENST00000458482 498 ntBASIC14.38□□□□□ -0.11
CDK3Q00526 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK3Q00526 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.38□□□□□ -0.11
CDK3Q00526 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK3Q00526 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.38□□□□□ -0.11
CDK3Q00526 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CDK3Q00526 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.38□□□□□ -0.11
CDK3Q00526 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDK3Q00526 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDK3Q00526 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK3Q00526 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
CDK3Q00526 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK3Q00526 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK3Q00526 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.37□□□□□ -0.11
CDK3Q00526 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CDK3Q00526 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CDK3Q00526 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.37□□□□□ -0.11
CDK3Q00526 ISCA2P1-201ENST00000425548 448 ntBASIC14.37□□□□□ -0.11
CDK3Q00526 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK3Q00526 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.37□□□□□ -0.11
CDK3Q00526 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.37□□□□□ -0.11
CDK3Q00526 PGAM1P5-201ENST00000548011 764 ntBASIC14.37□□□□□ -0.11
CDK3Q00526 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDK3Q00526 AL161670.2-201ENST00000557650 1227 ntBASIC14.37□□□□□ -0.11
CDK3Q00526 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.37□□□□□ -0.11
CDK3Q00526 AC124068.2-201ENST00000569473 1109 ntBASIC14.37□□□□□ -0.11
CDK3Q00526 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.37□□□□□ -0.11
CDK3Q00526 AC091812.3-201ENST00000621362 345 ntBASIC14.37□□□□□ -0.11
CDK3Q00526 CU633904.3-201ENST00000624042 1029 ntBASIC14.37□□□□□ -0.11
CDK3Q00526 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDK3Q00526 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CDK3Q00526 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
CDK3Q00526 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDK3Q00526 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.37□□□□□ -0.11
CDK3Q00526 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.37□□□□□ -0.11
CDK3Q00526 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK3Q00526 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDK3Q00526 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.37□□□□□ -0.11
CDK3Q00526 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CDK3Q00526 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDK3Q00526 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDK3Q00526 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDK3Q00526 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms