Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.64□□□□□ -0.39
ABCA4P78363 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.64□□□□□ -0.39
ABCA4P78363 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ABCA4P78363 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.64□□□□□ -0.39
ABCA4P78363 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.64□□□□□ -0.39
ABCA4P78363 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.64□□□□□ -0.39
ABCA4P78363 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
ABCA4P78363 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ABCA4P78363 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ABCA4P78363 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 TSPY25P-201ENST00000429463 745 ntBASIC12.63□□□□□ -0.39
ABCA4P78363 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.63□□□□□ -0.39
ABCA4P78363 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.63□□□□□ -0.39
ABCA4P78363 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.63□□□□□ -0.39
ABCA4P78363 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 AC138466.4-201ENST00000623965 852 ntBASIC12.63□□□□□ -0.39
ABCA4P78363 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ABCA4P78363 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 AC026691.1-201ENST00000602502 2017 ntBASIC12.63□□□□□ -0.39
ABCA4P78363 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 AC239868.1-201ENST00000369385 493 ntBASIC12.63□□□□□ -0.39
ABCA4P78363 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 RPL7P35-201ENST00000446943 740 ntBASIC12.63□□□□□ -0.39
ABCA4P78363 AP002803.1-201ENST00000528836 498 ntBASIC12.63□□□□□ -0.39
ABCA4P78363 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
ABCA4P78363 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ABCA4P78363 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
ABCA4P78363 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ABCA4P78363 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.62□□□□□ -0.39
ABCA4P78363 MYO15B-237ENST00000642007 4893 ntBASIC12.62□□□□□ -0.39
ABCA4P78363 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 CICP6-201ENST00000457191 2729 ntBASIC12.62□□□□□ -0.39
ABCA4P78363 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.62□□□□□ -0.39
ABCA4P78363 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ABCA4P78363 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC12.62□□□□□ -0.39
ABCA4P78363 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 OR2K2-202ENST00000374428 1038 ntBASIC12.62□□□□□ -0.39
ABCA4P78363 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.62□□□□□ -0.39
ABCA4P78363 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.62□□□□□ -0.39
ABCA4P78363 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC12.62□□□□□ -0.39
ABCA4P78363 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ABCA4P78363 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.62□□□□□ -0.39
ABCA4P78363 AC107464.3-201ENST00000609172 737 ntBASIC12.62□□□□□ -0.39
ABCA4P78363 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.62□□□□□ -0.39
ABCA4P78363 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 ZBED1P1-201ENST00000502364 1930 ntBASIC12.62□□□□□ -0.39
ABCA4P78363 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ABCA4P78363 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms