Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KCNQ4P56696 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KCNQ4P56696 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KCNQ4P56696 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC18.37■□□□□ 0.53
KCNQ4P56696 RNLS-203ENST00000437752 525 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNQ4P56696 CHCHD2P2-201ENST00000503744 321 ntBASIC18.37■□□□□ 0.53
KCNQ4P56696 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC18.37■□□□□ 0.53
KCNQ4P56696 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNQ4P56696 RN7SL121P-201ENST00000584223 273 ntBASIC18.37■□□□□ 0.53
KCNQ4P56696 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KCNQ4P56696 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNQ4P56696 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KCNQ4P56696 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KCNQ4P56696 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
KCNQ4P56696 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 ACE3P-201ENST00000423435 1973 ntBASIC18.37■□□□□ 0.53
KCNQ4P56696 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNQ4P56696 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.36■□□□□ 0.53
KCNQ4P56696 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
KCNQ4P56696 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.36■□□□□ 0.53
KCNQ4P56696 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNQ4P56696 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
KCNQ4P56696 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.36■□□□□ 0.53
KCNQ4P56696 VENTXP4-201ENST00000449029 958 ntBASIC18.36■□□□□ 0.53
KCNQ4P56696 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.36■□□□□ 0.53
KCNQ4P56696 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNQ4P56696 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 RN7SL288P-201ENST00000490496 291 ntBASIC18.36■□□□□ 0.53
KCNQ4P56696 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KCNQ4P56696 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNQ4P56696 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNQ4P56696 AL160191.2-201ENST00000603975 601 ntBASIC18.36■□□□□ 0.53
KCNQ4P56696 AC004686.1-201ENST00000605113 538 ntBASIC18.36■□□□□ 0.53
KCNQ4P56696 AC021016.3-201ENST00000608367 477 ntBASIC18.36■□□□□ 0.53
KCNQ4P56696 AC090386.2-201ENST00000623010 1039 ntBASIC18.36■□□□□ 0.53
KCNQ4P56696 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
KCNQ4P56696 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNQ4P56696 ZNF436-AS1-201ENST00000335648 2547 ntBASIC18.35■□□□□ 0.53
KCNQ4P56696 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNQ4P56696 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KCNQ4P56696 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KCNQ4P56696 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNQ4P56696 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNQ4P56696 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNQ4P56696 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNQ4P56696 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNQ4P56696 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KCNQ4P56696 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KCNQ4P56696 OR52M2P-201ENST00000414298 959 ntBASIC18.35■□□□□ 0.53
KCNQ4P56696 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
KCNQ4P56696 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KCNQ4P56696 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNQ4P56696 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNQ4P56696 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.35■□□□□ 0.53
KCNQ4P56696 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNQ4P56696 EMC4-208ENST00000559078 599 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNQ4P56696 AC023968.2-201ENST00000560593 1049 ntBASIC18.35■□□□□ 0.53
KCNQ4P56696 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNQ4P56696 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms