Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A2P52657 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A2P52657 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A2P52657 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A2P52657 RN7SL582P-201ENST00000491078 279 ntBASIC16.68■□□□□ 0.26
GTF2A2P52657 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A2P52657 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A2P52657 NDUFB10P1-201ENST00000567319 521 ntBASIC16.68■□□□□ 0.26
GTF2A2P52657 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.68■□□□□ 0.26
GTF2A2P52657 AC010632.2-201ENST00000588369 1224 ntBASIC16.68■□□□□ 0.26
GTF2A2P52657 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A2P52657 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.68■□□□□ 0.26
GTF2A2P52657 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.68■□□□□ 0.26
GTF2A2P52657 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GTF2A2P52657 CICP23-201ENST00000605013 2741 ntBASIC16.68■□□□□ 0.26
GTF2A2P52657 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.67■□□□□ 0.26
GTF2A2P52657 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
GTF2A2P52657 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 AC015688.4-201ENST00000580780 1647 ntBASIC16.67■□□□□ 0.26
GTF2A2P52657 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
GTF2A2P52657 RNVU1-8-201ENST00000364272 125 ntBASIC16.67■□□□□ 0.26
GTF2A2P52657 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.67■□□□□ 0.26
GTF2A2P52657 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.67■□□□□ 0.26
GTF2A2P52657 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 AC108734.2-201ENST00000420887 1069 ntBASIC16.67■□□□□ 0.26
GTF2A2P52657 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.67■□□□□ 0.26
GTF2A2P52657 RN7SL564P-201ENST00000496309 250 ntBASIC16.67■□□□□ 0.26
GTF2A2P52657 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.67■□□□□ 0.26
GTF2A2P52657 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.67■□□□□ 0.26
GTF2A2P52657 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
GTF2A2P52657 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.67■□□□□ 0.26
GTF2A2P52657 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.67■□□□□ 0.26
GTF2A2P52657 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.67■□□□□ 0.26
GTF2A2P52657 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.67■□□□□ 0.26
GTF2A2P52657 TMBIM7P-203ENST00000641617 1718 ntBASIC16.67■□□□□ 0.26
GTF2A2P52657 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.67■□□□□ 0.26
GTF2A2P52657 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
GTF2A2P52657 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GTF2A2P52657 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A2P52657 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
GTF2A2P52657 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A2P52657 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 MIR1301-201ENST00000408518 82 ntBASIC16.66■□□□□ 0.26
GTF2A2P52657 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC16.66■□□□□ 0.26
GTF2A2P52657 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.66■□□□□ 0.26
GTF2A2P52657 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GTF2A2P52657 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.66■□□□□ 0.26
GTF2A2P52657 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 AC063952.3-201ENST00000467756 308 ntBASIC16.66■□□□□ 0.26
GTF2A2P52657 AC008026.2-201ENST00000495438 348 ntBASIC16.66■□□□□ 0.26
GTF2A2P52657 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.66■□□□□ 0.26
GTF2A2P52657 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC16.66■□□□□ 0.26
GTF2A2P52657 GOLGA2P7-209ENST00000560408 745 ntBASIC16.66■□□□□ 0.26
GTF2A2P52657 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.66■□□□□ 0.26
GTF2A2P52657 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.66■□□□□ 0.26
GTF2A2P52657 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.66■□□□□ 0.26
GTF2A2P52657 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.66■□□□□ 0.26
GTF2A2P52657 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 LAP3P2-201ENST00000454686 1454 ntBASIC16.66■□□□□ 0.26
GTF2A2P52657 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.66■□□□□ 0.26
GTF2A2P52657 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GTF2A2P52657 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms